Scientific Publications

BIOS-SCOPE Publications
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Motivating Studies for BIOS-SCOPE
Carlson, C.A., Morris, R., Parsons, R., Treusch, A.H., Giovannoni, S.J., Vergin, K. (2009) Seasonal dynamics of SAR11 populations in the euphotic and mesopelagic zones of the northwestern Sargasso SeaThe ISME Journal 3: 283-295.

Carlson, C.A., Giovannoni, S.J., Hansell, D.A., Goldberg, S.J., Parsons, R., and Vergin K. (2004) Interactions among dissolved organic carbon, microbial processes, and community structure in the mesopelagic zone of the northwestern Sargasso Sea. Limnol. Oceanogr. 49(4): 1073-1083.

Carlson, C.A., Giovannoni, S.J., Hansell, D.A., Goldberg, S.J., Parsons, R., Otero, M.P., Vergin, K., and Wheeler, B.R. (2002) Effect of nutrient amendments on bacterioplankton production, community structure, and DOC utilization in the northwestern Sargasso Sea. Aquatic Microbial Ecology 30: 19-36.

Giovannoni, S., Vergin, K. and Carlson, C. (2014). Twenty-five years of omics at BATS. OCB News 7(1): 1-6.

Giovannoni, S.J. and Vergin, K.L. (2012) Seasonality in ocean microbial communities. Science 335: 671-676.

Giovannoni, S.J., Bibbs, L., Cho, J-C., Stapels, M.D., Desiderio, R., Vergin, K.L., Rappe, M.S., Laney, S., Wilhelm, L.J., Tripp, H.J., Mathur, E.J., Barofsky, D.F. (2005) Proteorhodopsin in the ubiquitous marine bacterium SAR11Nature 438(3): 82-85

Giovannoni, S.J., Tripp, H.J., Givan, S., Podar, M., Vergin, K.L., Baptista, D., Bibbs, L., Eads, J., Richardson, T.H., Noordewier, M., Rappe, M.S., Short, J.M., Carrington, J.C., Mathur, E.J. (2005) Genome streamlining in a cosmopolitan oceanic bacteriumScience 309: 1242-1245

Giovannoni, S. (2004) Oceans of bacteriaNature 430: 515-516

Goldberg, S.J., Carlson, C.A., Hansell, D.A., Nelson, N.B. and Siegel, D.A. (2009) Temporal dynamics of dissolved combined neutral sugars and the quality of dissolved organic matter in the Northwest Sargasso Sea. Deep-Sea Research I 56: 672-685.

Kujawinski EB, Longnecker K, Barott KL, Weber RJM, and Kido Soule MC. (2016) Microbial community structure affects marine dissolved organic matter composition. Frontiers in Marine Science 3, 1-15

Kujawinski EB (2011) The impact of microbial metabolism on marine dissolved organic matter. Annu Rev Mar Sci 3, 567-599.

Kujawinski EB, Longnecker K, Blough NV, Del Vecchio R, Finlay L, Kitner JB, and Giovannoni SJ. (2009) Identification of possible source markers in marine dissolved organic matter using ultrahigh resolution mass spectrometry. Geochim Cosmochim Acta 73, 4384-4399.

Kujawinski EB. (2002) Electrospray ionization Fourier transform ion cyclotron resonance mass spectrometry (ESI FT-ICR MS): characterization of complex environmental mixtures. Environmental Forensics 3, 207-216.

Morris, R.M., Rappe, M.S., Urbach, E., Connon, S.A., and Giovannoni, S.J. (2004) Prevalence of the Chlorfexi-related SAR202 bacterioplankton cluster throughout the mesopelagic zone and deep ocean. Applied and Environmental Microbiology 70(5): 2836-2842.

Morris, R.M., Rappe, M.S., Connon, S.A., Vergin, K.L., Siebold, W.A., Carlson, C.A., Giovannoni, S.J. (2002) SAR11 clade dominates ocean surface bacterioplankton communitiesNature 420: 806-810

Nelson, C.E., Carlson, C.A., Ewart, C.S., and Halewood, E.R. (2013) Community differentiation and population enrichment of Sargasso Sea bacterioplankton in the euphotic zone of a mesoscale mode-water eddy. Environmental Microbiology 16(3): 871-887. doi:10.1111/1462-2920.12241

Parsons, R.J., Breitbart, M., Lomas, M.W., Carlson, C. (2011) Ocean time-series reveals recurring seasonal patterns of virioplankton dynamics in the northwestern Sargasso SeaThe ISME Journal (August): 1-12.

Treusch, A.H., Demir-Hilton, E., Vergin, K.L., Worden, A.Z., Carlson, C.A., Donatz, M.G., Burton, R.M., and Giovannoni, S.J. (2012). Phytoplankton distribution patterns in the northwestern Sargasso Sea revealed by small subunit rRNA genes from plastids. The ISME Journal 6: 481-492.

Truesch, A.H., Vergin, K.L., Finlay, L.A., Donatz, M.G., Burton, R.M., Carlson, C.A. and Giovannoni, S.J. (2009) Seasonality and vertical structure of microbial communities in an ocean gyre. The ISME Journal: 1-16.

Vergin, K.L., Beszteri, B., Monier, A., Thrash, J.C., Temperton, B., Treusch, A.H., Kilpert, F., Worden, A.Z., and Giovannoni, S.J. (2013) High-resolution SAR11 ecotype dynamics at the Bermuda Atlantic Time-series Study site by phylogenetic placement of pyrosequences. The ISME Journal 7: 1322-1332.

Vergin, K.L., Done, B., Carlson, C.A. and Giovannoni, S.J. (2013) Spatiotemporal distributions of rare bacterioplankton populations indicate adaptive strategies in the oligotrophic ocean. Aquatic Microbial Ecology 71: 1-13.

Conference and Professional Presentations
21-26 Aug 2016, International Society for Microbial Ecology (ISME)
McLeod, K., Desmarais, M., Carlson, C., et al.
Distribution of the microbial lineages within the oxygen minimum zone of the mesopelagic Sargasso Sea and the relative contribution of chemoautotrophs
Poster
Abstract